STIM1

Protein-coding gene in the species Homo sapiens
STIM1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2K60, 3TEQ, 2MAJ, 2MAK, 4O9B

Identifiers
AliasesSTIM1, D11S4896E, GOK, IMD10, STRMK, TAM, TAM1, stromal interaction molecule 1
External IDsOMIM: 605921; MGI: 107476; HomoloGene: 20681; GeneCards: STIM1; OMA:STIM1 - orthologs
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Chromosome 11 (human)
Genomic location for STIM1
Genomic location for STIM1
Band11p15.4Start3,854,527 bp[1]
End4,093,210 bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for STIM1
Genomic location for STIM1
Band7 E2- E3|7 54.71 cMStart101,917,013 bp[2]
End102,086,526 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gastrocnemius muscle

  • minor salivary glands

  • stromal cell of endometrium

  • popliteal artery

  • left uterine tube

  • gastric mucosa

  • gallbladder

  • skin of abdomen

  • canal of the cervix

  • right coronary artery
Top expressed in
  • extraocular muscle

  • lip

  • plantaris muscle

  • spermatocyte

  • extensor digitorum longus muscle

  • lateral recess

  • superior frontal gyrus

  • esophagus

  • sternocleidomastoid muscle

  • soleus muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • calcium ion binding
  • calcium channel regulator activity
  • microtubule plus-end binding
  • metal ion binding
  • protease binding
  • protein binding
  • identical protein binding
Cellular component
  • cytoplasm
  • integral component of membrane
  • endoplasmic reticulum membrane
  • membrane
  • integral component of plasma membrane
  • cortical endoplasmic reticulum
  • sarcoplasmic reticulum
  • integral component of endoplasmic reticulum membrane
  • endoplasmic reticulum
  • sarcoplasmic reticulum membrane
  • microtubule
  • cytoskeleton
  • plasma membrane
Biological process
  • regulation of cardiac conduction
  • regulation of calcium ion transport
  • ion transport
  • detection of calcium ion
  • enamel mineralization
  • activation of store-operated calcium channel activity
  • calcium ion transport
  • cellular calcium ion homeostasis
  • regulation of store-operated calcium entry
  • store-operated calcium entry
  • positive regulation of angiogenesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6786

20866

Ensembl

ENSG00000167323

ENSMUSG00000030987

UniProt

Q13586

P70302

RefSeq (mRNA)

NM_003156
NM_001277961
NM_001277962

NM_009287
NM_001374058
NM_001374060
NM_001400557

RefSeq (protein)
NP_001264890
NP_001264891
NP_003147
NP_001369495
NP_001369496

NP_001369497
NP_001369498
NP_001369499
NP_001369500
NP_001369501
NP_001369502
NP_001369503
NP_001369504
NP_001369505
NP_001369506
NP_001369507
NP_001369508
NP_001369509
NP_001369510

NP_033313
NP_001360987
NP_001360989
NP_001387486

Location (UCSC)Chr 11: 3.85 – 4.09 MbChr 7: 101.92 – 102.09 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Stromal interaction molecule 1 is a protein that in humans is encoded by the STIM1 gene.[5][6][7] STIM1 has a single transmembrane domain, and is localized to the endoplasmic reticulum, and to a lesser extent to the plasma membrane.[8]

Even though the protein has been identified earlier, its function was unknown until recently. In 2005, it was discovered that STIM1 functions as a calcium sensor in the endoplasmic reticulum.[9][10] Upon activation of the IP3 receptor, the calcium concentration in the endoplasmic reticulum decreases, which is sensed by STIM1, via its EF hand domain. STIM1 activates the "store-operated" ORAI1 calcium ion channels in the plasma membrane, via intracellular STIM1 movement, clustering under plasma membrane and protein interaction with ORAI isoforms.[11][12][13] STIM1-mediated calcium entry is required for thrombin-induced disassembly of VE-cadherin adherens junctions.[14] 2-Aminoethoxydiphenyl borate (2-APB) and 4-chloro-3-ethylphenol (4-CEP) cause STIM1 clustering in a cell and prevent STIM1 moving toward plasma membrane.[15]

Interactions

STIM1 has been shown to interact with ORAI1, TMEM110 (STIMATE[16]), SERCA, TMEM66 (SARAF), and STIM2.[6]

Clinical relevance

STIM1 mutations are associated with Immunodeficiency 10, Tubular aggregate myopathy type 1 (TAM1), and Stormorken syndrome.[17]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000167323 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000030987 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Parker NJ, Begley CG, Smith PJ, Fox RM (Oct 1996). "Molecular cloning of a novel human gene (D11S4896E) at chromosomal region 11p15.5". Genomics. 37 (2): 253–6. doi:10.1006/geno.1996.0553. PMID 8921403.
  6. ^ a b Williams RT, Manji SS, Parker NJ, Hancock MS, Van Stekelenburg L, Eid JP, Senior PV, Kazenwadel JS, Shandala T, Saint R, Smith PJ, Dziadek MA (Aug 2001). "Identification and characterization of the STIM (stromal interaction molecule) gene family: coding for a novel class of transmembrane proteins". The Biochemical Journal. 357 (Pt 3): 673–85. doi:10.1042/0264-6021:3570673. PMC 1221997. PMID 11463338.
  7. ^ Williams RT, Senior PV, Van Stekelenburg L, Layton JE, Smith PJ, Dziadek MA (Apr 2002). "Stromal interaction molecule 1 (STIM1), a transmembrane protein with growth suppressor activity, contains an extracellular SAM domain modified by N-linked glycosylation". Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology. 1596 (1): 131–7. doi:10.1016/S0167-4838(02)00211-X. PMID 11983428.
  8. ^ Soboloff J, Rothberg BS, Madesh M, Gill DL (Sep 2012). "STIM proteins: dynamic calcium signal transducers". Nature Reviews Molecular Cell Biology. 13 (9): 549–65. doi:10.1038/nrm3414. PMC 3458427. PMID 22914293.
  9. ^ Roos J, DiGregorio PJ, Yeromin AV, Ohlsen K, Lioudyno M, Zhang S, Safrina O, Kozak JA, Wagner SL, Cahalan MD, Veliçelebi G, Stauderman KA (May 2005). "STIM1, an essential and conserved component of store-operated Ca2+ channel function". The Journal of Cell Biology. 169 (3): 435–45. doi:10.1083/jcb.200502019. PMC 2171946. PMID 15866891.
  10. ^ Liou J, Kim ML, Heo WD, Jones JT, Myers JW, Ferrell JE, Meyer T (Jul 2005). "STIM is a Ca2+ sensor essential for Ca2+-store-depletion-triggered Ca2+ influx". Current Biology. 15 (13): 1235–41. doi:10.1016/j.cub.2005.05.055. PMC 3186072. PMID 16005298.
  11. ^ Putney JW (Sep 2009). "Capacitative calcium entry: from concept to molecules". Immunological Reviews. 231 (1): 10–22. doi:10.1111/j.1600-065X.2009.00810.x. PMID 19754887. S2CID 32303982.
  12. ^ Zhou Y, Srinivasan P, Razavi S, Seymour S, Meraner P, Gudlur A, Stathopulos PB, Ikura M, Rao A, Hogan PG (Aug 2013). "Initial activation of STIM1, the regulator of store-operated calcium entry". Nature Structural & Molecular Biology. 20 (8): 973–81. doi:10.1038/nsmb.2625. PMC 3784406. PMID 23851458.
  13. ^ Ma G, Wei M, He L, Liu C, Wu B, Zhang SL, Jing J, Liang X, Senes A, Tan P, Li S, Sun A, Bi Y, Zhong L, Si H, Shen Y, Li M, Lee MS, Zhou W, Wang J, Wang Y, Zhou Y (2015-07-17). "Inside-out Ca(2+) signalling prompted by STIM1 conformational switch". Nature Communications. 6: 7826. Bibcode:2015NatCo...6.7826M. doi:10.1038/ncomms8826. PMC 4509486. PMID 26184105.
  14. ^ Soni D, Regmi SC, Wang DM, DebRoy A, Zhao YY, Vogel SM, Malik AB, Tiruppathi C (Apr 2017). "Pyk2 Phosphorylation of VE-PTP Downstream of STIM1 induced Ca2+ entry Regulates Disassembly of Adherens Junctions". American Journal of Physiology. Lung Cellular and Molecular Physiology. 312 (6): L1003–L1017. doi:10.1152/ajplung.00008.2017. PMC 5495943. PMID 28385807.
  15. ^ Zeng B, Chen GL, Xu SZ (Oct 2012). "Store-independent pathways for cytosolic STIM1 clustering in the regulation of store-operated Ca(2+) influx". Biochemical Pharmacology. 84 (8): 1024–35. doi:10.1016/j.bcp.2012.07.013. PMID 22842488.
  16. ^ Jing J, He L, Sun A, Quintana A, Ding Y, Ma G, Tan P, Liang X, Zheng X, Chen L, Shi X, Zhang SL, Zhong L, Huang Y, Dong MQ, Walker CL, Hogan PG, Wang Y, Zhou Y (Aug 2015). "Proteomic mapping of ER-PM junctions identifies STIMATE as a regulator of Ca(2+) influx". Nature Cell Biology. 17 (10): 1339–47. doi:10.1038/ncb3234. PMC 4589512. PMID 26322679.
  17. ^ "STROMAL INTERACTION MOLECULE 1; STIM1". www.omim.org. Retrieved 2023-11-13.


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